ClustAGE Plot

ClustAGE Plot produces a figure showing the distribution of elements clustered by ClustAGE in a circular representation.

Subelement File Upload:

Tip: Files can be dragged and dropped (in most browsers)

Subelement CSV file (_subelements.csv):
Subelement key file (_subelments.key.txt):

Options:

Minimum AGE size to represent in the figure
Minimum size of accessory elements to be labeled, in bases. Enter '0' for no labels
Figure height (enter '0' to auto-calculate)
Figure width (enter '0' to auto-calculate)
Internal radius
Genome ring thickness
Bin ring thickness
Show figure legend YesNo

Font Options:

	Labels	Ruler	Legend
Font	Default Dialog DialogInput Monospaced Serif SansSerif	Default Dialog DialogInput Monospaced Serif SansSerif	Default Dialog DialogInput Monospaced Serif SansSerif
Font Style	plain bold italic bold-italic	plain bold italic bold-italic	plain bold italic bold-italic
Font Size	8 9 10 11 12 14 16 18 20 22 24 26 28 36 48 72	8 9 10 11 12 14 16 18 20 22 24 26 28 36 48 72	8 9 10 11 12 14 16 18 20 22 24 26 28 36 48 72
Position			upper-left upper-center upper-right middle-left middle-center middle-right lower-left lower-center lower-right

Color Options:

Gradient color #1
Gradient color #2
Color genomes by rank NoYes
If selected, genomes with the same rank values will be given the same color. Unranked genomes will have different colors.

Bin color #1
Bin color #2

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